Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf187Q8BFX1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf187Q8BFX1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf187Q8BFX1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.08□□□□□ -0.15
Rnf187Q8BFX1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf187Q8BFX1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf187Q8BFX1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Gm20949-201ENSMUST00000206478 952 ntBASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf187Q8BFX1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Syt7-204ENSMUST00000223586 1344 ntBASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rnf187Q8BFX1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf187Q8BFX1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms