Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm23270-201ENSMUST00000104055 131 ntBASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm38317-201ENSMUST00000195564 343 ntBASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp6nlQ80XC3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp6nlQ80XC3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.4□□□□□ -0.11
Usp6nlQ80XC3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm14704-201ENSMUST00000120300 874 ntBASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm2546-201ENSMUST00000182630 991 ntBASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm44967-201ENSMUST00000207047 631 ntBASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp6nlQ80XC3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms