Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Gm29608-201ENSMUST00000190444 463 ntBASIC15.09■□□□□ 0.01
Prpf40bQ80W14 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.09■□□□□ 0.01
Prpf40bQ80W14 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Gm21769-201ENSMUST00000211922 111 ntBASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf40bQ80W14 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf40bQ80W14 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.08■□□□□ 0
Prpf40bQ80W14 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.08■□□□□ 0
Prpf40bQ80W14 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm24990-201ENSMUST00000157406 323 ntBASIC15.08■□□□□ 0
Prpf40bQ80W14 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm24514-201ENSMUST00000174961 285 ntBASIC15.08■□□□□ 0
Prpf40bQ80W14 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.08■□□□□ 0
Prpf40bQ80W14 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.08■□□□□ 0
Prpf40bQ80W14 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.08■□□□□ 0
Prpf40bQ80W14 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.08■□□□□ 0
Prpf40bQ80W14 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf40bQ80W14 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Prpf40bQ80W14 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.07■□□□□ 0
Prpf40bQ80W14 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.07■□□□□ 0
Prpf40bQ80W14 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf40bQ80W14 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms