Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Gm6023-201ENSMUST00000118217 606 ntBASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Gm38266-201ENSMUST00000194931 421 ntBASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubfd1Q78JW9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm3961-201ENSMUST00000204425 994 ntBASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm18935-201ENSMUST00000212692 664 ntBASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ubfd1Q78JW9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm29396-201ENSMUST00000185659 716 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm8099-201ENSMUST00000200510 742 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Olfr284-202ENSMUST00000206647 966 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubfd1Q78JW9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubfd1Q78JW9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ubfd1Q78JW9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ubfd1Q78JW9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms