Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gm13296-201ENSMUST00000117854 997 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gm27552-201ENSMUST00000183351 62 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gm27844-201ENSMUST00000183613 62 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Rprl1-202ENSMUST00000198476 238 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gzmn-202ENSMUST00000225535 989 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx55Q6ZPL9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gm24845-201ENSMUST00000158034 109 ntBASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Gm10312-201ENSMUST00000078515 489 ntBASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx55Q6ZPL9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Gm14832-201ENSMUST00000121289 322 ntBASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Gm24749-201ENSMUST00000157838 343 ntBASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Mir1943-201ENSMUST00000158276 73 ntBASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 883.7 ms