Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.02□□□□□ -0.64
Rif1Q6PR54 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rif1Q6PR54 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.02□□□□□ -0.65
Rif1Q6PR54 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.02□□□□□ -0.65
Rif1Q6PR54 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.02□□□□□ -0.65
Rif1Q6PR54 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.02□□□□□ -0.65
Rif1Q6PR54 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Cog3-203ENSMUST00000227473 4197 ntBASIC11.02□□□□□ -0.65
Rif1Q6PR54 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.02□□□□□ -0.65
Rif1Q6PR54 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rif1Q6PR54 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Mir6998-201ENSMUST00000183343 64 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Mir7076-201ENSMUST00000183519 74 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm9136-201ENSMUST00000193368 454 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm3619-201ENSMUST00000219947 775 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm9166-201ENSMUST00000120293 561 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm14585-201ENSMUST00000120713 634 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm12783-201ENSMUST00000121425 397 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm23771-201ENSMUST00000178702 110 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.01□□□□□ -0.65
Rif1Q6PR54 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rif1Q6PR54 Gm8712-201ENSMUST00000221090 701 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.01□□□□□ -0.65
Rif1Q6PR54 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms