Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm22018-201ENSMUST00000104357 131 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm11618-201ENSMUST00000117946 267 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm27516-201ENSMUST00000184237 98 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm38002-201ENSMUST00000193255 180 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gm16372-201ENSMUST00000073088 450 ntBASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hmgb4Q6P8W9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Hmgb4Q6P8W9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Gm14350-201ENSMUST00000116642 640 ntBASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Gm37497-201ENSMUST00000195830 798 ntBASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hmgb4Q6P8W9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Gm14723-201ENSMUST00000118686 215 ntBASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms