Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smchd1Q6P5D8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm23270-201ENSMUST00000104055 131 ntBASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm13736-201ENSMUST00000119272 253 ntBASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm5950-201ENSMUST00000213337 772 ntBASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smchd1Q6P5D8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gm21769-201ENSMUST00000211922 111 ntBASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smchd1Q6P5D8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms