Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Casc4Q6P2L7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm11814-201ENSMUST00000119515 929 ntBASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm27486-201ENSMUST00000184923 80 ntBASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Casc4Q6P2L7 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Gm8652-201ENSMUST00000181363 964 ntBASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Casc4Q6P2L7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Casc4Q6P2L7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.24□□□□□ -0.29
Casc4Q6P2L7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms