Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ParpbpQ6IRT3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm11434-201ENSMUST00000122379 629 ntBASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Gm7653-201ENSMUST00000214567 508 ntBASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.3□□□□□ -0.44
ParpbpQ6IRT3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Gm12928-201ENSMUST00000117115 573 ntBASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Gm2495-201ENSMUST00000191160 466 ntBASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ParpbpQ6IRT3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms