Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim27Q62158 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim27Q62158 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim27Q62158 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim27Q62158 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim27Q62158 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim27Q62158 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim27Q62158 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.03■□□□□ 0.16
Trim27Q62158 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim27Q62158 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.03■□□□□ 0.16
Trim27Q62158 Gm16479-201ENSMUST00000121706 932 ntBASIC16.03■□□□□ 0.16
Trim27Q62158 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim27Q62158 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trim27Q62158 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim27Q62158 Gm27331-201ENSMUST00000183705 60 ntBASIC16.03■□□□□ 0.16
Trim27Q62158 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.03■□□□□ 0.16
Trim27Q62158 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.03■□□□□ 0.16
Trim27Q62158 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.03■□□□□ 0.16
Trim27Q62158 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.03■□□□□ 0.16
Trim27Q62158 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim27Q62158 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim27Q62158 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim27Q62158 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim27Q62158 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trim27Q62158 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim27Q62158 Gm22331-201ENSMUST00000158066 136 ntBASIC16.02■□□□□ 0.16
Trim27Q62158 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim27Q62158 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim27Q62158 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.02■□□□□ 0.16
Trim27Q62158 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Trim27Q62158 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.02■□□□□ 0.16
Trim27Q62158 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Gm6091-201ENSMUST00000098307 165 ntBASIC16.02■□□□□ 0.16
Trim27Q62158 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim27Q62158 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.02■□□□□ 0.15
Trim27Q62158 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trim27Q62158 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trim27Q62158 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim27Q62158 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim27Q62158 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim27Q62158 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim27Q62158 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trim27Q62158 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.01■□□□□ 0.15
Trim27Q62158 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim27Q62158 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim27Q62158 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim27Q62158 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim27Q62158 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Trim27Q62158 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim27Q62158 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim27Q62158 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.01■□□□□ 0.15
Trim27Q62158 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.01■□□□□ 0.15
Trim27Q62158 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.01■□□□□ 0.15
Trim27Q62158 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms