Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.18□□□□□ -0.3
Six4Q61321 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Six4Q61321 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.18□□□□□ -0.3
Six4Q61321 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.18□□□□□ -0.3
Six4Q61321 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.18□□□□□ -0.3
Six4Q61321 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.18□□□□□ -0.3
Six4Q61321 Gm27682-201ENSMUST00000183930 110 ntBASIC13.18□□□□□ -0.3
Six4Q61321 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.18□□□□□ -0.3
Six4Q61321 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.18□□□□□ -0.3
Six4Q61321 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.18□□□□□ -0.3
Six4Q61321 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.18□□□□□ -0.3
Six4Q61321 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Six4Q61321 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Six4Q61321 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.18□□□□□ -0.3
Six4Q61321 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six4Q61321 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Six4Q61321 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Six4Q61321 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Six4Q61321 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Six4Q61321 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Six4Q61321 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Six4Q61321 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.17□□□□□ -0.3
Six4Q61321 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.17□□□□□ -0.3
Six4Q61321 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Six4Q61321 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.17□□□□□ -0.3
Six4Q61321 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Six4Q61321 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six4Q61321 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Six4Q61321 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.16□□□□□ -0.3
Six4Q61321 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Six4Q61321 Gm11425-201ENSMUST00000119608 498 ntBASIC13.16□□□□□ -0.3
Six4Q61321 Gm12363-201ENSMUST00000122250 668 ntBASIC13.16□□□□□ -0.3
Six4Q61321 Gm2231-201ENSMUST00000125661 612 ntBASIC13.16□□□□□ -0.3
Six4Q61321 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.16□□□□□ -0.3
Six4Q61321 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.16□□□□□ -0.3
Six4Q61321 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.16□□□□□ -0.3
Six4Q61321 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Six4Q61321 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Gm9396-201ENSMUST00000076703 567 ntBASIC13.16□□□□□ -0.3
Six4Q61321 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.16□□□□□ -0.3
Six4Q61321 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Six4Q61321 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six4Q61321 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms