Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps54Q5SPW0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Gm32025-201ENSMUST00000217960 307 ntBASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.67■□□□□ 0.1
Vps54Q5SPW0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.67■□□□□ 0.1
Vps54Q5SPW0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.67■□□□□ 0.1
Vps54Q5SPW0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Gm14704-201ENSMUST00000120300 874 ntBASIC15.66■□□□□ 0.1
Vps54Q5SPW0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps54Q5SPW0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm11591-201ENSMUST00000120063 702 ntBASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm27572-201ENSMUST00000183702 255 ntBASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm4768-201ENSMUST00000206199 686 ntBASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Gm9823-201ENSMUST00000051212 327 ntBASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Vps54Q5SPW0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms