Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps13aQ5H8C4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps13aQ5H8C4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Mir8115-201ENSMUST00000184992 119 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm43752-201ENSMUST00000198475 697 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm12501-201ENSMUST00000119163 529 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm25881-201ENSMUST00000157783 103 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm7851-201ENSMUST00000117574 323 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Gm40879-201ENSMUST00000220759 612 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps13aQ5H8C4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm16071-201ENSMUST00000119589 793 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm17826-201ENSMUST00000189720 798 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm37299-201ENSMUST00000193951 826 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm8018-201ENSMUST00000173536 789 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gm18204-201ENSMUST00000209835 793 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps13aQ5H8C4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 Gm14585-201ENSMUST00000120713 634 ntBASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vps13aQ5H8C4 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms