Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rnf20Q5DTM8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Gm6745-201ENSMUST00000199216 526 ntBASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Gm9908-201ENSMUST00000211534 448 ntBASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf20Q5DTM8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Gm13612-201ENSMUST00000119276 390 ntBASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Gm45384-201ENSMUST00000210451 277 ntBASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rnf20Q5DTM8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Gm7287-201ENSMUST00000205267 602 ntBASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf20Q5DTM8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf20Q5DTM8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms