Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Mir6392-201ENSMUST00000184924 108 ntBASIC12.94□□□□□ -0.34
Scn2bQ56A07 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.94□□□□□ -0.34
Scn2bQ56A07 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.93□□□□□ -0.34
Scn2bQ56A07 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Gm38144-201ENSMUST00000192790 465 ntBASIC12.93□□□□□ -0.34
Scn2bQ56A07 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.93□□□□□ -0.34
Scn2bQ56A07 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Gm15823-201ENSMUST00000064305 670 ntBASIC12.93□□□□□ -0.34
Scn2bQ56A07 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn2bQ56A07 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.92□□□□□ -0.34
Scn2bQ56A07 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Gm11524-201ENSMUST00000119349 807 ntBASIC12.92□□□□□ -0.34
Scn2bQ56A07 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.92□□□□□ -0.34
Scn2bQ56A07 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.92□□□□□ -0.34
Scn2bQ56A07 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn2bQ56A07 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.92□□□□□ -0.34
Scn2bQ56A07 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Scn2bQ56A07 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.92□□□□□ -0.34
Scn2bQ56A07 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.92□□□□□ -0.34
Scn2bQ56A07 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn2bQ56A07 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms