Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Gm8738-201ENSMUST00000172606 329 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Mospd4-201ENSMUST00000180618 576 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38aQ4FK66 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm15370-201ENSMUST00000117158 253 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm45865-201ENSMUST00000211815 945 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm7046-201ENSMUST00000221351 977 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Prpf38aQ4FK66 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm12502-201ENSMUST00000120197 444 ntBASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm14704-201ENSMUST00000120300 874 ntBASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm44364-201ENSMUST00000198368 141 ntBASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm7783-201ENSMUST00000204795 781 ntBASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm6334-201ENSMUST00000207083 228 ntBASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38aQ4FK66 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms