Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Gm27375-201ENSMUST00000183799 107 ntBASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gm8602-201ENSMUST00000184045 607 ntBASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Zfp560Q3URI6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Gm6458-201ENSMUST00000211573 635 ntBASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp560Q3URI6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Gm4984-201ENSMUST00000115987 360 ntBASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Gm37922-201ENSMUST00000195596 455 ntBASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp560Q3URI6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms