Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cks1brtQ3UNC9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cks1brtQ3UNC9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.34□□□□□ -0.91
Cks1brtQ3UNC9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms