Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Gm1848-201ENSMUST00000120711 789 ntBASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Gm13182-201ENSMUST00000122241 312 ntBASIC11.93□□□□□ -0.5
Spg11Q3UHA3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Gm4604-201ENSMUST00000025040 390 ntBASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Spg11Q3UHA3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm14724-201ENSMUST00000118400 537 ntBASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm12036-201ENSMUST00000120008 530 ntBASIC11.92□□□□□ -0.5
Spg11Q3UHA3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.92□□□□□ -0.5
Spg11Q3UHA3 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm18460-201ENSMUST00000208088 464 ntBASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm9166-201ENSMUST00000120293 561 ntBASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm27530-201ENSMUST00000184096 98 ntBASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Spg11Q3UHA3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm5100-201ENSMUST00000195631 589 ntBASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm6905-201ENSMUST00000205729 511 ntBASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm7904-201ENSMUST00000217049 465 ntBASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.91□□□□□ -0.5
Spg11Q3UHA3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms