Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Q3U1D9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.35□□□□□ -0.59
Q3U1D9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.35□□□□□ -0.59
Q3U1D9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.35□□□□□ -0.59
Q3U1D9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.35□□□□□ -0.59
Q3U1D9 Gm17208-201ENSMUST00000168388 535 ntBASIC11.35□□□□□ -0.59
Q3U1D9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Q3U1D9 Gm44364-201ENSMUST00000198368 141 ntBASIC11.35□□□□□ -0.59
Q3U1D9 Gm19931-201ENSMUST00000198920 368 ntBASIC11.35□□□□□ -0.59
Q3U1D9 Gm43822-201ENSMUST00000200285 476 ntBASIC11.35□□□□□ -0.59
Q3U1D9 Gm18584-201ENSMUST00000203098 964 ntBASIC11.35□□□□□ -0.59
Q3U1D9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.35□□□□□ -0.59
Q3U1D9 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.35□□□□□ -0.59
Q3U1D9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.35□□□□□ -0.59
Q3U1D9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.35□□□□□ -0.59
Q3U1D9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Q3U1D9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Q3U1D9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Q3U1D9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.34□□□□□ -0.59
Q3U1D9 Gm12241-201ENSMUST00000118330 726 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Gm11591-201ENSMUST00000120063 702 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Gm12363-201ENSMUST00000122250 668 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.34□□□□□ -0.59
Q3U1D9 Gm29396-201ENSMUST00000185659 716 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.34□□□□□ -0.59
Q3U1D9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Gm5781-201ENSMUST00000219792 443 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.34□□□□□ -0.59
Q3U1D9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Q3U1D9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Q3U1D9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Q3U1D9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Q3U1D9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Q3U1D9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Q3U1D9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.33□□□□□ -0.6
Q3U1D9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Q3U1D9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms