Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.86□□□□□ -0.35
Q3KNL4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.85□□□□□ -0.35
Q3KNL4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Q3KNL4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Q3KNL4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Q3KNL4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Q3KNL4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Q3KNL4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Gm15376-201ENSMUST00000122258 783 ntBASIC12.85□□□□□ -0.35
Q3KNL4 Gm26464-201ENSMUST00000157094 305 ntBASIC12.85□□□□□ -0.35
Q3KNL4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Q3KNL4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.85□□□□□ -0.35
Q3KNL4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.85□□□□□ -0.35
Q3KNL4 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.85□□□□□ -0.35
Q3KNL4 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.85□□□□□ -0.35
Q3KNL4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Q3KNL4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Q3KNL4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Q3KNL4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.85□□□□□ -0.35
Q3KNL4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.84□□□□□ -0.35
Q3KNL4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.84□□□□□ -0.35
Q3KNL4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.84□□□□□ -0.35
Q3KNL4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.84□□□□□ -0.35
Q3KNL4 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.84□□□□□ -0.35
Q3KNL4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.84□□□□□ -0.35
Q3KNL4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Q3KNL4 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.84□□□□□ -0.35
Q3KNL4 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.84□□□□□ -0.35
Q3KNL4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Q3KNL4 Gm24694-201ENSMUST00000180054 110 ntBASIC12.84□□□□□ -0.35
Q3KNL4 Gm27663-201ENSMUST00000184839 110 ntBASIC12.84□□□□□ -0.35
Q3KNL4 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.84□□□□□ -0.35
Q3KNL4 Gm42550-201ENSMUST00000201553 960 ntBASIC12.84□□□□□ -0.35
Q3KNL4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.84□□□□□ -0.35
Q3KNL4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.84□□□□□ -0.35
Q3KNL4 Gm5867-201ENSMUST00000063197 592 ntBASIC12.84□□□□□ -0.35
Q3KNL4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Q3KNL4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Q3KNL4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Q3KNL4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Q3KNL4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Q3KNL4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Q3KNL4 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.83□□□□□ -0.36
Q3KNL4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Q3KNL4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms