Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 CT571271.1-201ENSMUST00000227071 670 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm12314-201ENSMUST00000118104 538 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm5267-201ENSMUST00000191574 1045 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 AC117769.1-201ENSMUST00000224716 1120 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm28719-201ENSMUST00000187779 1757 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm24294-201ENSMUST00000158295 277 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm26286-201ENSMUST00000104166 134 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm8815-201ENSMUST00000173809 620 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm6606-201ENSMUST00000193613 947 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm2448-201ENSMUST00000207080 559 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm9791-201ENSMUST00000060997 447 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Mir341-201ENSMUST00000093593 96 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Mir6934-201ENSMUST00000183965 62 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Ighv5-1-201ENSMUST00000193324 353 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 AC165260.3-202ENSMUST00000224550 1031 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm13910-201ENSMUST00000121752 1428 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm7815-201ENSMUST00000196104 832 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Gm18561-201ENSMUST00000206027 804 ntBASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC6.7□□□□□ -1.34
Ush2AQ2QI47 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm15373-201ENSMUST00000121495 214 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Gm45575-201ENSMUST00000210283 548 ntBASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Ush2AQ2QI47 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms