Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm2991-201ENSMUST00000173338 480 ntBASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm6334-201ENSMUST00000207083 228 ntBASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.53□□□□□ -0.4
Hoxc4Q08624 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc4Q08624 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc4Q08624 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Gm7584-201ENSMUST00000175829 940 ntBASIC12.52□□□□□ -0.41
Hoxc4Q08624 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.52□□□□□ -0.41
Hoxc4Q08624 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Daam2-202ENSMUST00000224595 1926 ntBASIC12.52□□□□□ -0.41
Hoxc4Q08624 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc4Q08624 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gm37259-201ENSMUST00000193903 849 ntBASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.51□□□□□ -0.41
Hoxc4Q08624 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.51□□□□□ -0.41
Hoxc4Q08624 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc4Q08624 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms