Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.89□□□□□ -0.67
Tff1Q08423 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.89□□□□□ -0.67
Tff1Q08423 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tff1Q08423 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tff1Q08423 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tff1Q08423 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.88□□□□□ -0.67
Tff1Q08423 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.88□□□□□ -0.67
Tff1Q08423 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.88□□□□□ -0.67
Tff1Q08423 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tff1Q08423 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.88□□□□□ -0.67
Tff1Q08423 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tff1Q08423 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.88□□□□□ -0.67
Tff1Q08423 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.88□□□□□ -0.67
Tff1Q08423 Gm15678-201ENSMUST00000117573 960 ntBASIC10.88□□□□□ -0.67
Tff1Q08423 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.88□□□□□ -0.67
Tff1Q08423 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.88□□□□□ -0.67
Tff1Q08423 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.88□□□□□ -0.67
Tff1Q08423 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Tff1Q08423 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tff1Q08423 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Tff1Q08423 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tff1Q08423 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.88□□□□□ -0.67
Tff1Q08423 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.88□□□□□ -0.67
Tff1Q08423 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tff1Q08423 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tff1Q08423 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tff1Q08423 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tff1Q08423 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.87□□□□□ -0.67
Tff1Q08423 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tff1Q08423 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tff1Q08423 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Tff1Q08423 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Tff1Q08423 Gm11425-201ENSMUST00000119608 498 ntBASIC10.87□□□□□ -0.67
Tff1Q08423 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.87□□□□□ -0.67
Tff1Q08423 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.87□□□□□ -0.67
Tff1Q08423 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 AY702102-202ENSMUST00000194651 1173 ntBASIC10.87□□□□□ -0.67
Tff1Q08423 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.87□□□□□ -0.67
Tff1Q08423 Gm19220-201ENSMUST00000222682 803 ntBASIC10.87□□□□□ -0.67
Tff1Q08423 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Gm9396-201ENSMUST00000076703 567 ntBASIC10.87□□□□□ -0.67
Tff1Q08423 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tff1Q08423 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.87□□□□□ -0.67
Tff1Q08423 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms