Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.27□□□□□ -0.28
Ebf1Q07802 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf1Q07802 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf1Q07802 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ebf1Q07802 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Gm13123-201ENSMUST00000122173 492 ntBASIC13.27□□□□□ -0.29
Ebf1Q07802 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.27□□□□□ -0.29
Ebf1Q07802 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Gm27320-201ENSMUST00000184892 109 ntBASIC13.27□□□□□ -0.29
Ebf1Q07802 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.27□□□□□ -0.29
Ebf1Q07802 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.27□□□□□ -0.29
Ebf1Q07802 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.27□□□□□ -0.29
Ebf1Q07802 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.27□□□□□ -0.29
Ebf1Q07802 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ebf1Q07802 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf1Q07802 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm24255-201ENSMUST00000104481 128 ntBASIC13.26□□□□□ -0.29
Ebf1Q07802 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm13297-201ENSMUST00000120205 934 ntBASIC13.26□□□□□ -0.29
Ebf1Q07802 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm6334-201ENSMUST00000207083 228 ntBASIC13.26□□□□□ -0.29
Ebf1Q07802 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.26□□□□□ -0.29
Ebf1Q07802 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.26□□□□□ -0.29
Ebf1Q07802 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.26□□□□□ -0.29
Ebf1Q07802 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf1Q07802 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf1Q07802 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.26□□□□□ -0.29
Ebf1Q07802 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ebf1Q07802 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.25□□□□□ -0.29
Ebf1Q07802 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf1Q07802 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms