Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox4Q06831 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sox4Q06831 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Sox4Q06831 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox4Q06831 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox4Q06831 Gm1335-201ENSMUST00000121653 386 ntBASIC12.86□□□□□ -0.35
Sox4Q06831 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.86□□□□□ -0.35
Sox4Q06831 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Gm7029-201ENSMUST00000173226 450 ntBASIC12.86□□□□□ -0.35
Sox4Q06831 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox4Q06831 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox4Q06831 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sox4Q06831 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sox4Q06831 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Sox4Q06831 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Sox4Q06831 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.86□□□□□ -0.35
Sox4Q06831 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox4Q06831 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.86□□□□□ -0.35
Sox4Q06831 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sox4Q06831 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox4Q06831 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
Sox4Q06831 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox4Q06831 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.85□□□□□ -0.35
Sox4Q06831 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox4Q06831 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox4Q06831 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox4Q06831 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox4Q06831 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.85□□□□□ -0.35
Sox4Q06831 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.85□□□□□ -0.35
Sox4Q06831 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox4Q06831 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.85□□□□□ -0.35
Sox4Q06831 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox4Q06831 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox4Q06831 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox4Q06831 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox4Q06831 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Sox4Q06831 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sox4Q06831 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.84□□□□□ -0.35
Sox4Q06831 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms