Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.05□□□□□ -0.32
Col6a2Q02788 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.05□□□□□ -0.32
Col6a2Q02788 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a2Q02788 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.05□□□□□ -0.32
Col6a2Q02788 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Col6a2Q02788 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.05□□□□□ -0.32
Col6a2Q02788 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a2Q02788 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.04□□□□□ -0.32
Col6a2Q02788 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.04□□□□□ -0.32
Col6a2Q02788 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col6a2Q02788 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Mir874-201ENSMUST00000104769 76 ntBASIC13.04□□□□□ -0.32
Col6a2Q02788 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col6a2Q02788 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Col6a2Q02788 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.04□□□□□ -0.32
Col6a2Q02788 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.04□□□□□ -0.32
Col6a2Q02788 Gm45331-201ENSMUST00000209868 554 ntBASIC13.04□□□□□ -0.32
Col6a2Q02788 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.04□□□□□ -0.32
Col6a2Q02788 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Snora73a-201ENSMUST00000082453 205 ntBASIC13.04□□□□□ -0.32
Col6a2Q02788 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Col6a2Q02788 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.04□□□□□ -0.32
Col6a2Q02788 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col6a2Q02788 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a2Q02788 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.03□□□□□ -0.32
Col6a2Q02788 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm11637-201ENSMUST00000120601 592 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm12363-201ENSMUST00000122250 668 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm25261-201ENSMUST00000157416 134 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.03□□□□□ -0.32
Col6a2Q02788 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm6222-202ENSMUST00000182143 629 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm38002-201ENSMUST00000193255 180 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a2Q02788 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Gm7399-201ENSMUST00000032395 858 ntBASIC13.03□□□□□ -0.32
Col6a2Q02788 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a2Q02788 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a2Q02788 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a2Q02788 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms