Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.94□□□□□ -0.5
Scn1bP97952 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.94□□□□□ -0.5
Scn1bP97952 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.94□□□□□ -0.5
Scn1bP97952 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.94□□□□□ -0.5
Scn1bP97952 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Scn1bP97952 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Scn1bP97952 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn1bP97952 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn1bP97952 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.93□□□□□ -0.5
Scn1bP97952 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Scn1bP97952 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.93□□□□□ -0.5
Scn1bP97952 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Scn1bP97952 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.93□□□□□ -0.5
Scn1bP97952 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.93□□□□□ -0.5
Scn1bP97952 Gm27494-201ENSMUST00000184735 189 ntBASIC11.93□□□□□ -0.5
Scn1bP97952 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn1bP97952 Gm45612-201ENSMUST00000211320 160 ntBASIC11.93□□□□□ -0.5
Scn1bP97952 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.93□□□□□ -0.5
Scn1bP97952 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.93□□□□□ -0.5
Scn1bP97952 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Scn1bP97952 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn1bP97952 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn1bP97952 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.92□□□□□ -0.5
Scn1bP97952 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.92□□□□□ -0.5
Scn1bP97952 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scn1bP97952 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Daam2-202ENSMUST00000224595 1926 ntBASIC11.92□□□□□ -0.5
Scn1bP97952 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn1bP97952 Mir1895-201ENSMUST00000122615 79 ntBASIC11.92□□□□□ -0.5
Scn1bP97952 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.92□□□□□ -0.5
Scn1bP97952 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.92□□□□□ -0.5
Scn1bP97952 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn1bP97952 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Scn1bP97952 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn1bP97952 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn1bP97952 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.91□□□□□ -0.5
Scn1bP97952 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.91□□□□□ -0.5
Scn1bP97952 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Scn1bP97952 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn1bP97952 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms