Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.42□□□□□ -0.1
Hmgb1P63158 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hmgb1P63158 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hmgb1P63158 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hmgb1P63158 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb1P63158 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.41□□□□□ -0.1
Hmgb1P63158 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.41□□□□□ -0.1
Hmgb1P63158 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.41□□□□□ -0.1
Hmgb1P63158 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.41□□□□□ -0.1
Hmgb1P63158 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.41□□□□□ -0.1
Hmgb1P63158 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.41□□□□□ -0.1
Hmgb1P63158 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb1P63158 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb1P63158 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hmgb1P63158 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hmgb1P63158 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.4□□□□□ -0.1
Hmgb1P63158 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.4□□□□□ -0.1
Hmgb1P63158 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Gm28631-201ENSMUST00000190740 334 ntBASIC14.4□□□□□ -0.1
Hmgb1P63158 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Gm18307-201ENSMUST00000206864 949 ntBASIC14.4□□□□□ -0.1
Hmgb1P63158 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.4□□□□□ -0.1
Hmgb1P63158 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmgb1P63158 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmgb1P63158 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgb1P63158 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.4□□□□□ -0.11
Hmgb1P63158 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hmgb1P63158 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.39□□□□□ -0.11
Hmgb1P63158 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgb1P63158 Gm13689-201ENSMUST00000119360 685 ntBASIC14.39□□□□□ -0.11
Hmgb1P63158 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.39□□□□□ -0.11
Hmgb1P63158 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.39□□□□□ -0.11
Hmgb1P63158 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmgb1P63158 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.39□□□□□ -0.11
Hmgb1P63158 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Hmgb1P63158 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hmgb1P63158 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hmgb1P63158 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgb1P63158 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Hmgb1P63158 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms