Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm21871-201ENSMUST00000194621 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.95□□□□□ -0.34
Crnkl1P63154 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.94□□□□□ -0.34
Crnkl1P63154 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.94□□□□□ -0.34
Crnkl1P63154 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.94□□□□□ -0.34
Crnkl1P63154 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm5566-201ENSMUST00000116118 459 ntBASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm27622-201ENSMUST00000183779 60 ntBASIC12.94□□□□□ -0.34
Crnkl1P63154 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Crnkl1P63154 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Crnkl1P63154 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Gm17837-201ENSMUST00000186435 985 ntBASIC12.93□□□□□ -0.34
Crnkl1P63154 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.93□□□□□ -0.34
Crnkl1P63154 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Crnkl1P63154 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Crnkl1P63154 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms