Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm12363-201ENSMUST00000122250 668 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.83□□□□□ -0.36
Lhx1P63006 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm27572-201ENSMUST00000183702 255 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm19309-201ENSMUST00000218295 205 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.83□□□□□ -0.36
Lhx1P63006 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Lhx1P63006 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx1P63006 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lhx1P63006 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx1P63006 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx1P63006 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx1P63006 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.82□□□□□ -0.36
Lhx1P63006 Gm25261-201ENSMUST00000157416 134 ntBASIC12.82□□□□□ -0.36
Lhx1P63006 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.82□□□□□ -0.36
Lhx1P63006 Gm42627-201ENSMUST00000197347 224 ntBASIC12.82□□□□□ -0.36
Lhx1P63006 Gm8099-201ENSMUST00000200510 742 ntBASIC12.82□□□□□ -0.36
Lhx1P63006 Gm6013-201ENSMUST00000212264 699 ntBASIC12.82□□□□□ -0.36
Lhx1P63006 Gm45880-201ENSMUST00000213041 853 ntBASIC12.82□□□□□ -0.36
Lhx1P63006 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.82□□□□□ -0.36
Lhx1P63006 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lhx1P63006 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Lhx1P63006 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.82□□□□□ -0.36
Lhx1P63006 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx1P63006 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx1P63006 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lhx1P63006 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lhx1P63006 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lhx1P63006 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx1P63006 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.81□□□□□ -0.36
Lhx1P63006 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
Lhx1P63006 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.81□□□□□ -0.36
Lhx1P63006 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.81□□□□□ -0.36
Lhx1P63006 Gm22121-201ENSMUST00000175148 54 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms