Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lsm6P62313 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lsm6P62313 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.49□□□□□ -0.57
Lsm6P62313 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.49□□□□□ -0.57
Lsm6P62313 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.49□□□□□ -0.57
Lsm6P62313 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.49□□□□□ -0.57
Lsm6P62313 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.49□□□□□ -0.57
Lsm6P62313 Gm8463-201ENSMUST00000208573 613 ntBASIC11.49□□□□□ -0.57
Lsm6P62313 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lsm6P62313 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.49□□□□□ -0.57
Lsm6P62313 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lsm6P62313 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lsm6P62313 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lsm6P62313 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.49□□□□□ -0.57
Lsm6P62313 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.49□□□□□ -0.57
Lsm6P62313 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm6P62313 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm6P62313 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.48□□□□□ -0.57
Lsm6P62313 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Lsm6P62313 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm6P62313 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm6P62313 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.48□□□□□ -0.57
Lsm6P62313 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm6P62313 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.48□□□□□ -0.57
Lsm6P62313 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Lsm6P62313 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.48□□□□□ -0.57
Lsm6P62313 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm6P62313 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.48□□□□□ -0.57
Lsm6P62313 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Lsm6P62313 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.48□□□□□ -0.57
Lsm6P62313 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lsm6P62313 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm6P62313 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Lsm6P62313 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.47□□□□□ -0.57
Lsm6P62313 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lsm6P62313 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.47□□□□□ -0.57
Lsm6P62313 Gm12091-201ENSMUST00000146791 830 ntBASIC11.47□□□□□ -0.57
Lsm6P62313 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.47□□□□□ -0.57
Lsm6P62313 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm6P62313 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.47□□□□□ -0.57
Lsm6P62313 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms