Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CirbpP60824 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC9.62□□□□□ -0.87
CirbpP60824 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CirbpP60824 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gm45638-201ENSMUST00000211507 2878 ntBASIC9.61□□□□□ -0.87
CirbpP60824 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gm15376-201ENSMUST00000122258 783 ntBASIC9.61□□□□□ -0.87
CirbpP60824 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gm2445-201ENSMUST00000182798 989 ntBASIC9.61□□□□□ -0.87
CirbpP60824 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.61□□□□□ -0.87
CirbpP60824 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.61□□□□□ -0.87
CirbpP60824 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.61□□□□□ -0.87
CirbpP60824 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.61□□□□□ -0.87
CirbpP60824 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
CirbpP60824 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
CirbpP60824 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.61□□□□□ -0.87
CirbpP60824 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.61□□□□□ -0.87
CirbpP60824 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
CirbpP60824 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
CirbpP60824 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.6□□□□□ -0.87
CirbpP60824 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.6□□□□□ -0.87
CirbpP60824 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CirbpP60824 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CirbpP60824 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
CirbpP60824 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Gm11918-201ENSMUST00000121660 179 ntBASIC9.6□□□□□ -0.87
CirbpP60824 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.6□□□□□ -0.87
CirbpP60824 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Gm28911-201ENSMUST00000188837 117 ntBASIC9.6□□□□□ -0.87
CirbpP60824 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.6□□□□□ -0.87
CirbpP60824 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.6□□□□□ -0.87
CirbpP60824 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.6□□□□□ -0.87
CirbpP60824 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CirbpP60824 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms