Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Gm27533-201ENSMUST00000183800 152 ntBASIC11.62□□□□□ -0.55
Sf3b6P59708 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.62□□□□□ -0.55
Sf3b6P59708 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.62□□□□□ -0.55
Sf3b6P59708 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Sf3b6P59708 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sf3b6P59708 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.61□□□□□ -0.55
Sf3b6P59708 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Gm12585-201ENSMUST00000117307 290 ntBASIC11.61□□□□□ -0.55
Sf3b6P59708 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.61□□□□□ -0.55
Sf3b6P59708 Gm44344-201ENSMUST00000200287 129 ntBASIC11.61□□□□□ -0.55
Sf3b6P59708 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sf3b6P59708 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3b6P59708 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.6□□□□□ -0.55
Sf3b6P59708 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Sf3b6P59708 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sf3b6P59708 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Gm14057-201ENSMUST00000120631 482 ntBASIC11.6□□□□□ -0.55
Sf3b6P59708 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.6□□□□□ -0.55
Sf3b6P59708 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b6P59708 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms