Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.35□□□□□ -0.43
Nup43P59235 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.35□□□□□ -0.43
Nup43P59235 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nup43P59235 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.35□□□□□ -0.43
Nup43P59235 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.35□□□□□ -0.43
Nup43P59235 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nup43P59235 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup43P59235 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nup43P59235 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.35□□□□□ -0.43
Nup43P59235 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nup43P59235 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nup43P59235 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup43P59235 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.34□□□□□ -0.43
Nup43P59235 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Gm12390-201ENSMUST00000117897 397 ntBASIC12.34□□□□□ -0.43
Nup43P59235 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.34□□□□□ -0.43
Nup43P59235 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.34□□□□□ -0.43
Nup43P59235 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Gm27331-201ENSMUST00000183705 60 ntBASIC12.34□□□□□ -0.43
Nup43P59235 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.34□□□□□ -0.43
Nup43P59235 Gm37497-201ENSMUST00000195830 798 ntBASIC12.34□□□□□ -0.43
Nup43P59235 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.34□□□□□ -0.43
Nup43P59235 Gm29705-201ENSMUST00000212598 474 ntBASIC12.34□□□□□ -0.43
Nup43P59235 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.34□□□□□ -0.43
Nup43P59235 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.34□□□□□ -0.43
Nup43P59235 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Nup43P59235 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nup43P59235 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nup43P59235 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup43P59235 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nup43P59235 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.33□□□□□ -0.44
Nup43P59235 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Nup43P59235 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Nup43P59235 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup43P59235 Gm18558-201ENSMUST00000186253 1214 ntBASIC12.33□□□□□ -0.44
Nup43P59235 Gm28693-202ENSMUST00000190758 331 ntBASIC12.33□□□□□ -0.44
Nup43P59235 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.33□□□□□ -0.44
Nup43P59235 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Nup43P59235 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms