Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.08□□□□□ -0.32
Lim2P56563 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lim2P56563 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Lim2P56563 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lim2P56563 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lim2P56563 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lim2P56563 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.07□□□□□ -0.32
Lim2P56563 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Lim2P56563 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lim2P56563 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.07□□□□□ -0.32
Lim2P56563 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.07□□□□□ -0.32
Lim2P56563 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Gm27331-201ENSMUST00000183705 60 ntBASIC13.07□□□□□ -0.32
Lim2P56563 Gm29127-201ENSMUST00000188304 517 ntBASIC13.07□□□□□ -0.32
Lim2P56563 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.07□□□□□ -0.32
Lim2P56563 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lim2P56563 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lim2P56563 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Lim2P56563 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lim2P56563 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lim2P56563 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lim2P56563 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.06□□□□□ -0.32
Lim2P56563 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.06□□□□□ -0.32
Lim2P56563 Gm11425-201ENSMUST00000119608 498 ntBASIC13.06□□□□□ -0.32
Lim2P56563 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Gm37922-201ENSMUST00000195596 455 ntBASIC13.06□□□□□ -0.32
Lim2P56563 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Gm29705-201ENSMUST00000212598 474 ntBASIC13.06□□□□□ -0.32
Lim2P56563 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Gm9396-201ENSMUST00000076703 567 ntBASIC13.06□□□□□ -0.32
Lim2P56563 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lim2P56563 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lim2P56563 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lim2P56563 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms