Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CckbrP56481 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.13□□□□□ -0.47
CckbrP56481 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.13□□□□□ -0.47
CckbrP56481 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.13□□□□□ -0.47
CckbrP56481 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.13□□□□□ -0.47
CckbrP56481 Proscos-202ENSMUST00000178990 666 ntBASIC12.13□□□□□ -0.47
CckbrP56481 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.13□□□□□ -0.47
CckbrP56481 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.13□□□□□ -0.47
CckbrP56481 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Gm10012-201ENSMUST00000078252 192 ntBASIC12.13□□□□□ -0.47
CckbrP56481 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CckbrP56481 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
CckbrP56481 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
CckbrP56481 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CckbrP56481 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CckbrP56481 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.12□□□□□ -0.47
CckbrP56481 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
CckbrP56481 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Gm11618-201ENSMUST00000117946 267 ntBASIC12.12□□□□□ -0.47
CckbrP56481 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.12□□□□□ -0.47
CckbrP56481 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CckbrP56481 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.12□□□□□ -0.47
CckbrP56481 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CckbrP56481 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.12□□□□□ -0.47
CckbrP56481 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.12□□□□□ -0.47
CckbrP56481 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.12□□□□□ -0.47
CckbrP56481 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CckbrP56481 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CckbrP56481 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CckbrP56481 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CckbrP56481 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CckbrP56481 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CckbrP56481 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
CckbrP56481 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CckbrP56481 Gm11978-201ENSMUST00000122315 466 ntBASIC12.11□□□□□ -0.47
CckbrP56481 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms