Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Gm22121-201ENSMUST00000175148 54 ntBASIC13.66□□□□□ -0.22
Ephb3P54754 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.66□□□□□ -0.22
Ephb3P54754 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ephb3P54754 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Gm45224-201ENSMUST00000208203 414 ntBASIC13.66□□□□□ -0.22
Ephb3P54754 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.66□□□□□ -0.22
Ephb3P54754 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.66□□□□□ -0.22
Ephb3P54754 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.66□□□□□ -0.22
Ephb3P54754 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.66□□□□□ -0.22
Ephb3P54754 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ephb3P54754 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ephb3P54754 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.65□□□□□ -0.22
Ephb3P54754 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ephb3P54754 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.65□□□□□ -0.22
Ephb3P54754 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ephb3P54754 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ephb3P54754 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ephb3P54754 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ephb3P54754 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.65□□□□□ -0.22
Ephb3P54754 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.65□□□□□ -0.22
Ephb3P54754 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ephb3P54754 Gm5904-201ENSMUST00000210286 865 ntBASIC13.65□□□□□ -0.22
Ephb3P54754 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.65□□□□□ -0.22
Ephb3P54754 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.65□□□□□ -0.22
Ephb3P54754 Gm8712-201ENSMUST00000221090 701 ntBASIC13.65□□□□□ -0.22
Ephb3P54754 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.65□□□□□ -0.22
Ephb3P54754 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ephb3P54754 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Ephb3P54754 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.65□□□□□ -0.22
Ephb3P54754 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ephb3P54754 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ephb3P54754 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Ephb3P54754 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.64□□□□□ -0.23
Ephb3P54754 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.64□□□□□ -0.23
Ephb3P54754 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ephb3P54754 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.64□□□□□ -0.23
Ephb3P54754 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.64□□□□□ -0.23
Ephb3P54754 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ephb3P54754 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.64□□□□□ -0.23
Ephb3P54754 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.64□□□□□ -0.23
Ephb3P54754 Gm44405-201ENSMUST00000198952 126 ntBASIC13.64□□□□□ -0.23
Ephb3P54754 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ephb3P54754 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ephb3P54754 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms