Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh6P54276 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Msh6P54276 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.46■□□□□ 0.22
Msh6P54276 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Msh6P54276 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msh6P54276 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.46■□□□□ 0.22
Msh6P54276 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Msh6P54276 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Msh6P54276 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.45■□□□□ 0.22
Msh6P54276 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
Msh6P54276 Gm13875-201ENSMUST00000120162 282 ntBASIC16.45■□□□□ 0.22
Msh6P54276 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.45■□□□□ 0.22
Msh6P54276 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Msh6P54276 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.45■□□□□ 0.22
Msh6P54276 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Msh6P54276 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh6P54276 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.44■□□□□ 0.22
Msh6P54276 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Msh6P54276 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.44■□□□□ 0.22
Msh6P54276 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Gm8099-201ENSMUST00000200510 742 ntBASIC16.44■□□□□ 0.22
Msh6P54276 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.44■□□□□ 0.22
Msh6P54276 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.44■□□□□ 0.22
Msh6P54276 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.44■□□□□ 0.22
Msh6P54276 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh6P54276 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.44■□□□□ 0.22
Msh6P54276 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Msh6P54276 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Msh6P54276 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.43■□□□□ 0.22
Msh6P54276 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Mir874-201ENSMUST00000104769 76 ntBASIC16.43■□□□□ 0.22
Msh6P54276 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Msh6P54276 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.43■□□□□ 0.22
Msh6P54276 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.43■□□□□ 0.22
Msh6P54276 Mir6927-201ENSMUST00000184494 71 ntBASIC16.43■□□□□ 0.22
Msh6P54276 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.43■□□□□ 0.22
Msh6P54276 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Msh6P54276 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.43■□□□□ 0.22
Msh6P54276 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.43■□□□□ 0.22
Msh6P54276 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Msh6P54276 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.43■□□□□ 0.22
Msh6P54276 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Msh6P54276 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms