Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.56□□□□□ -0.4
Sox3P53784 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sox3P53784 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox3P53784 Gm15782-201ENSMUST00000121073 445 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Gm10156-201ENSMUST00000122364 462 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Proscos-202ENSMUST00000178990 666 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Gm2383-201ENSMUST00000181461 807 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox3P53784 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Gm6334-201ENSMUST00000207083 228 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox3P53784 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox3P53784 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.55□□□□□ -0.4
Sox3P53784 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Gm8213-201ENSMUST00000118191 441 ntBASIC12.54□□□□□ -0.4
Sox3P53784 Gm12241-201ENSMUST00000118330 726 ntBASIC12.54□□□□□ -0.4
Sox3P53784 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Gm27320-201ENSMUST00000184892 109 ntBASIC12.54□□□□□ -0.4
Sox3P53784 Gm38223-201ENSMUST00000194484 695 ntBASIC12.54□□□□□ -0.4
Sox3P53784 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.54□□□□□ -0.4
Sox3P53784 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Sox3P53784 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Sox3P53784 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.54□□□□□ -0.4
Sox3P53784 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox3P53784 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Sox3P53784 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sox3P53784 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox3P53784 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sox3P53784 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox3P53784 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox3P53784 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox3P53784 Gm24255-201ENSMUST00000104481 128 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms