Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lbx1P52955 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.64□□□□□ -0.39
Lbx1P52955 Gm11354-201ENSMUST00000121974 422 ntBASIC12.64□□□□□ -0.39
Lbx1P52955 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.64□□□□□ -0.39
Lbx1P52955 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lbx1P52955 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Lbx1P52955 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.64□□□□□ -0.39
Lbx1P52955 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.64□□□□□ -0.39
Lbx1P52955 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.64□□□□□ -0.39
Lbx1P52955 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.64□□□□□ -0.39
Lbx1P52955 Gm45527-201ENSMUST00000211052 774 ntBASIC12.64□□□□□ -0.39
Lbx1P52955 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.64□□□□□ -0.39
Lbx1P52955 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Lbx1P52955 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lbx1P52955 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lbx1P52955 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lbx1P52955 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.63□□□□□ -0.39
Lbx1P52955 Gm15515-201ENSMUST00000117827 822 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 Gm12943-201ENSMUST00000119616 210 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.63□□□□□ -0.39
Lbx1P52955 Gm25043-201ENSMUST00000158604 212 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Gm37246-201ENSMUST00000192665 835 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.63□□□□□ -0.39
Lbx1P52955 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.63□□□□□ -0.39
Lbx1P52955 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Gm10312-201ENSMUST00000078515 489 ntBASIC12.63□□□□□ -0.39
Lbx1P52955 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Lbx1P52955 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lbx1P52955 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Lbx1P52955 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lbx1P52955 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lbx1P52955 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.62□□□□□ -0.39
Lbx1P52955 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lbx1P52955 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Lbx1P52955 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lbx1P52955 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lbx1P52955 Gm15711-201ENSMUST00000118889 535 ntBASIC12.62□□□□□ -0.39
Lbx1P52955 Gm12380-201ENSMUST00000119012 544 ntBASIC12.62□□□□□ -0.39
Lbx1P52955 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.62□□□□□ -0.39
Lbx1P52955 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Gm42511-201ENSMUST00000196160 234 ntBASIC12.62□□□□□ -0.39
Lbx1P52955 Gm18463-201ENSMUST00000207258 474 ntBASIC12.62□□□□□ -0.39
Lbx1P52955 Gm18204-201ENSMUST00000209835 793 ntBASIC12.62□□□□□ -0.39
Lbx1P52955 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lbx1P52955 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.62□□□□□ -0.39
Lbx1P52955 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.62□□□□□ -0.39
Lbx1P52955 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lbx1P52955 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lbx1P52955 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms