Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.94□□□□□ -0.34
Pdx1P52946 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.94□□□□□ -0.34
Pdx1P52946 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pdx1P52946 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pdx1P52946 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.93□□□□□ -0.34
Pdx1P52946 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pdx1P52946 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Gm28693-202ENSMUST00000190758 331 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 Gm37922-201ENSMUST00000195596 455 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Pdx1P52946 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.93□□□□□ -0.34
Pdx1P52946 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.93□□□□□ -0.34
Pdx1P52946 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pdx1P52946 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pdx1P52946 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.93□□□□□ -0.34
Pdx1P52946 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pdx1P52946 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.93□□□□□ -0.34
Pdx1P52946 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pdx1P52946 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.92□□□□□ -0.34
Pdx1P52946 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdx1P52946 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Gm24644-201ENSMUST00000157114 139 ntBASIC12.92□□□□□ -0.34
Pdx1P52946 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Gm27331-201ENSMUST00000183705 60 ntBASIC12.92□□□□□ -0.34
Pdx1P52946 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.92□□□□□ -0.34
Pdx1P52946 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.92□□□□□ -0.34
Pdx1P52946 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pdx1P52946 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.92□□□□□ -0.34
Pdx1P52946 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.92□□□□□ -0.34
Pdx1P52946 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.92□□□□□ -0.34
Pdx1P52946 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Pdx1P52946 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pdx1P52946 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdx1P52946 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdx1P52946 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.91□□□□□ -0.34
Pdx1P52946 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdx1P52946 Gm17150-201ENSMUST00000165577 381 ntBASIC12.91□□□□□ -0.34
Pdx1P52946 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.91□□□□□ -0.34
Pdx1P52946 Gm37497-201ENSMUST00000195830 798 ntBASIC12.91□□□□□ -0.34
Pdx1P52946 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.91□□□□□ -0.34
Pdx1P52946 Gm29705-201ENSMUST00000212598 474 ntBASIC12.91□□□□□ -0.34
Pdx1P52946 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.91□□□□□ -0.34
Pdx1P52946 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms