Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shmt1P50431 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.81□□□□□ -0.2
Shmt1P50431 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shmt1P50431 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Shmt1P50431 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Shmt1P50431 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.81□□□□□ -0.2
Shmt1P50431 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.81□□□□□ -0.2
Shmt1P50431 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Gm19163-201ENSMUST00000223313 780 ntBASIC13.81□□□□□ -0.2
Shmt1P50431 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.81□□□□□ -0.2
Shmt1P50431 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shmt1P50431 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shmt1P50431 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Shmt1P50431 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shmt1P50431 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm15198-201ENSMUST00000117283 177 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm25927-201ENSMUST00000175058 117 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm37042-201ENSMUST00000193816 581 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.8□□□□□ -0.2
Shmt1P50431 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Shmt1P50431 Olfr582-201ENSMUST00000098212 960 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Shmt1P50431 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.8□□□□□ -0.2
Shmt1P50431 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt1P50431 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.79□□□□□ -0.2
Shmt1P50431 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.79□□□□□ -0.2
Shmt1P50431 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt1P50431 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms