Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Gm1335-201ENSMUST00000121653 386 ntBASIC13.71□□□□□ -0.21
Rfx2P48379 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.71□□□□□ -0.21
Rfx2P48379 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.71□□□□□ -0.21
Rfx2P48379 Gm27572-201ENSMUST00000183702 255 ntBASIC13.71□□□□□ -0.21
Rfx2P48379 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.71□□□□□ -0.21
Rfx2P48379 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rfx2P48379 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rfx2P48379 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx2P48379 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx2P48379 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx2P48379 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx2P48379 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rfx2P48379 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Rfx2P48379 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rfx2P48379 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.7□□□□□ -0.22
Rfx2P48379 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rfx2P48379 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rfx2P48379 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfx2P48379 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Gm11618-201ENSMUST00000117946 267 ntBASIC13.7□□□□□ -0.22
Rfx2P48379 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Rfx2P48379 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Rfx2P48379 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Rfx2P48379 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.7□□□□□ -0.22
Rfx2P48379 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.7□□□□□ -0.22
Rfx2P48379 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rfx2P48379 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.7□□□□□ -0.22
Rfx2P48379 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rfx2P48379 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rfx2P48379 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rfx2P48379 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.7□□□□□ -0.22
Rfx2P48379 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.7□□□□□ -0.22
Rfx2P48379 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Rfx2P48379 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rfx2P48379 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.7□□□□□ -0.22
Rfx2P48379 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.69□□□□□ -0.22
Rfx2P48379 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.69□□□□□ -0.22
Rfx2P48379 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfx2P48379 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfx2P48379 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms