Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gli1P47806 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gli1P47806 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gli1P47806 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.78□□□□□ -0.36
Gli1P47806 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.78□□□□□ -0.36
Gli1P47806 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.78□□□□□ -0.36
Gli1P47806 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.78□□□□□ -0.36
Gli1P47806 Gm28911-201ENSMUST00000188837 117 ntBASIC12.78□□□□□ -0.36
Gli1P47806 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.78□□□□□ -0.36
Gli1P47806 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.78□□□□□ -0.36
Gli1P47806 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.78□□□□□ -0.36
Gli1P47806 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.78□□□□□ -0.36
Gli1P47806 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gli1P47806 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gli1P47806 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gli1P47806 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gli1P47806 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.78□□□□□ -0.36
Gli1P47806 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Gli1P47806 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gli1P47806 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gli1P47806 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gli1P47806 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gli1P47806 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gli1P47806 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gli1P47806 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.77□□□□□ -0.37
Gli1P47806 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.77□□□□□ -0.37
Gli1P47806 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.77□□□□□ -0.37
Gli1P47806 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gli1P47806 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gli1P47806 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gli1P47806 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.77□□□□□ -0.37
Gli1P47806 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Gli1P47806 Gm5354-201ENSMUST00000182417 973 ntBASIC12.77□□□□□ -0.37
Gli1P47806 Gm27701-201ENSMUST00000184498 110 ntBASIC12.77□□□□□ -0.37
Gli1P47806 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.77□□□□□ -0.37
Gli1P47806 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.77□□□□□ -0.37
Gli1P47806 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.77□□□□□ -0.37
Gli1P47806 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gli1P47806 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.77□□□□□ -0.37
Gli1P47806 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.77□□□□□ -0.37
Gli1P47806 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gli1P47806 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Gli1P47806 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gli1P47806 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.76□□□□□ -0.37
Gli1P47806 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.76□□□□□ -0.37
Gli1P47806 Gm12742-201ENSMUST00000117326 410 ntBASIC12.76□□□□□ -0.37
Gli1P47806 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.76□□□□□ -0.37
Gli1P47806 Gm12341-201ENSMUST00000119724 503 ntBASIC12.76□□□□□ -0.37
Gli1P47806 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.76□□□□□ -0.37
Gli1P47806 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms