Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sox18P43680 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox18P43680 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Sox18P43680 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sox18P43680 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox18P43680 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sox18P43680 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.63□□□□□ -0.39
Sox18P43680 Gm15276-201ENSMUST00000145953 498 ntBASIC12.63□□□□□ -0.39
Sox18P43680 Mir1943-201ENSMUST00000158276 73 ntBASIC12.63□□□□□ -0.39
Sox18P43680 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Sox18P43680 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox18P43680 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.63□□□□□ -0.39
Sox18P43680 Gm18584-201ENSMUST00000203098 964 ntBASIC12.63□□□□□ -0.39
Sox18P43680 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Gm44967-201ENSMUST00000207047 631 ntBASIC12.63□□□□□ -0.39
Sox18P43680 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.63□□□□□ -0.39
Sox18P43680 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox18P43680 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox18P43680 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox18P43680 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox18P43680 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Sox18P43680 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox18P43680 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Sox18P43680 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox18P43680 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Sox18P43680 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sox18P43680 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Gm9083-201ENSMUST00000120423 819 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Gm11637-201ENSMUST00000120601 592 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Gm13570-201ENSMUST00000140763 309 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Gm26736-201ENSMUST00000180425 1236 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Gm26956-201ENSMUST00000182176 986 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Gm3508-201ENSMUST00000186012 792 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Ighv10-4-201ENSMUST00000193702 299 ntBASIC12.62□□□□□ -0.39
Sox18P43680 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox18P43680 Prl7a1-203ENSMUST00000224852 1283 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.62□□□□□ -0.39
Sox18P43680 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox18P43680 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox18P43680 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox18P43680 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Sox18P43680 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox18P43680 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox18P43680 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox18P43680 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.62□□□□□ -0.39
Sox18P43680 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox18P43680 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox18P43680 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms