Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Gm11956-201ENSMUST00000119525 512 ntBASIC13.51□□□□□ -0.25
HttP42859 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.51□□□□□ -0.25
HttP42859 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.51□□□□□ -0.25
HttP42859 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HttP42859 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.51□□□□□ -0.25
HttP42859 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
HttP42859 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.5□□□□□ -0.25
HttP42859 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.5□□□□□ -0.25
HttP42859 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Gm25076-201ENSMUST00000104098 132 ntBASIC13.5□□□□□ -0.25
HttP42859 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.5□□□□□ -0.25
HttP42859 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HttP42859 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HttP42859 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.5□□□□□ -0.25
HttP42859 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.5□□□□□ -0.25
HttP42859 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.5□□□□□ -0.25
HttP42859 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
HttP42859 Gm11836-201ENSMUST00000121022 441 ntBASIC13.5□□□□□ -0.25
HttP42859 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
HttP42859 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HttP42859 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HttP42859 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HttP42859 Mir339-201ENSMUST00000083659 96 ntBASIC13.5□□□□□ -0.25
HttP42859 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HttP42859 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.5□□□□□ -0.25
HttP42859 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HttP42859 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HttP42859 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Gm37852-201ENSMUST00000193027 350 ntBASIC13.49□□□□□ -0.25
HttP42859 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.49□□□□□ -0.25
HttP42859 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Gm10288-201ENSMUST00000084614 537 ntBASIC13.49□□□□□ -0.25
HttP42859 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HttP42859 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HttP42859 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.49□□□□□ -0.25
HttP42859 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.49□□□□□ -0.25
HttP42859 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HttP42859 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.49□□□□□ -0.25
HttP42859 Gm13916-201ENSMUST00000117368 628 ntBASIC13.49□□□□□ -0.25
HttP42859 Gm23085-201ENSMUST00000157849 293 ntBASIC13.49□□□□□ -0.25
HttP42859 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.49□□□□□ -0.25
HttP42859 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.49□□□□□ -0.25
HttP42859 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.49□□□□□ -0.25
HttP42859 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HttP42859 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.49□□□□□ -0.25
HttP42859 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HttP42859 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Gm13019-201ENSMUST00000120000 276 ntBASIC13.48□□□□□ -0.25
HttP42859 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.48□□□□□ -0.25
HttP42859 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.48□□□□□ -0.25
HttP42859 Gm23045-201ENSMUST00000175041 96 ntBASIC13.48□□□□□ -0.25
HttP42859 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.48□□□□□ -0.25
HttP42859 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HttP42859 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.48□□□□□ -0.25
HttP42859 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HttP42859 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.48□□□□□ -0.25
HttP42859 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
HttP42859 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HttP42859 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HttP42859 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms