Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.38□□□□□ -0.27
Cxcl12P40224 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Gm27627-201ENSMUST00000183644 150 ntBASIC13.38□□□□□ -0.27
Cxcl12P40224 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.38□□□□□ -0.27
Cxcl12P40224 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.38□□□□□ -0.27
Cxcl12P40224 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cxcl12P40224 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cxcl12P40224 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm11450-201ENSMUST00000121144 333 ntBASIC13.37□□□□□ -0.27
Cxcl12P40224 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm37666-201ENSMUST00000194110 866 ntBASIC13.37□□□□□ -0.27
Cxcl12P40224 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.37□□□□□ -0.27
Cxcl12P40224 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.37□□□□□ -0.27
Cxcl12P40224 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cxcl12P40224 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.37□□□□□ -0.27
Cxcl12P40224 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Gm12015-201ENSMUST00000117065 843 ntBASIC13.36□□□□□ -0.27
Cxcl12P40224 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.36□□□□□ -0.27
Cxcl12P40224 Gm45598-202ENSMUST00000210719 986 ntBASIC13.36□□□□□ -0.27
Cxcl12P40224 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl12P40224 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms