Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LdlrP35951 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.03□□□□□ -0.32
LdlrP35951 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
LdlrP35951 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LdlrP35951 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LdlrP35951 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LdlrP35951 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LdlrP35951 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.02□□□□□ -0.32
LdlrP35951 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.02□□□□□ -0.32
LdlrP35951 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LdlrP35951 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LdlrP35951 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.02□□□□□ -0.33
LdlrP35951 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LdlrP35951 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.02□□□□□ -0.33
LdlrP35951 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LdlrP35951 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LdlrP35951 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.02□□□□□ -0.33
LdlrP35951 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.02□□□□□ -0.33
LdlrP35951 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.02□□□□□ -0.33
LdlrP35951 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.02□□□□□ -0.33
LdlrP35951 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.02□□□□□ -0.33
LdlrP35951 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LdlrP35951 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.02□□□□□ -0.33
LdlrP35951 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.02□□□□□ -0.33
LdlrP35951 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LdlrP35951 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LdlrP35951 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LdlrP35951 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LdlrP35951 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LdlrP35951 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.01□□□□□ -0.33
LdlrP35951 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.01□□□□□ -0.33
LdlrP35951 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.01□□□□□ -0.33
LdlrP35951 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LdlrP35951 Gm27701-201ENSMUST00000184498 110 ntBASIC13.01□□□□□ -0.33
LdlrP35951 Mir6420-201ENSMUST00000185032 102 ntBASIC13.01□□□□□ -0.33
LdlrP35951 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
LdlrP35951 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.01□□□□□ -0.33
LdlrP35951 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.01□□□□□ -0.33
LdlrP35951 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.01□□□□□ -0.33
LdlrP35951 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms